Insertion junction: CLIP2.035678_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035678
Chromosome:chromosome 7
Location:2459575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329200 SPL21,SPLH1 (1 of 3) PTHR18934:SF143 - DEAD/DEAH BOX HELICASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGCATATGCAATGTAGTTGACTGTGTTGATTCGCAGCTGCAGCCT
Internal bar code:GCATCTGAGCGGGTCCTCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACACGCGAAAGGCTATG
Suggested primer 2:GCATGTGACATCTGGACCGA