Insertion junction: CLIP2.035679_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035679
Chromosome:chromosome 14
Location:2968076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACATGCCGCCGGCGGCGGCGGCGGCGGCGGCGGCGACGGCTGGAGCGG
Internal bar code:TTATGTTTTGTTTGGCTAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCGCGTGTGTGGATAC
Suggested primer 2:GTAAAAGGGGGAGTGGGAGC