Insertion junction: CLIP2.035685_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035685
Chromosome:chromosome 14
Location:1871778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619900 PHX22,PFH22 Putative prolyl 4-hydroxylase; (1 of 1) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTTTTTGCTCCACCGCTACCTCCCATTCCTGCACCCCGCCCCCTCCA
Internal bar code:AGGTATATCGGATTTAATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTACACACGCCACTTG
Suggested primer 2:CAGGCCAAACAAACCTCTGC