Insertion junction: CLIP2.035687_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035687
Chromosome:chromosome 1
Location:3180822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020264 VPS30,ATG6,APG6 (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6); Autophagy-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGCTCATAATATTGAAAAGGAAGCGGTAGGTGTCGGGAGTCAGTCGC
Internal bar code:CCGCCCTTGTGACAGGCCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTGGTGGTAGTGGTGCC
Suggested primer 2:ACCCCAGAGATGGTACCCTC