Insertion junction: CLIP2.035689_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035689
Chromosome:chromosome 10
Location:3954759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446850 (1 of 10) PF02373 - JmjC domain, hydroxylase (JmjC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGAGGTGCATGGCGCCGTCGTGCGGCCTGACCTCCAACGTCCGCCACG
Internal bar code:AGATTATATGACCCGCTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3514
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCAAGCACAACCGCAA
Suggested primer 2:CTGTGGCATTGCTTTGCAGT