Insertion junction: CLIP2.035689_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035689
Chromosome:chromosome 10
Location:3954760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446850 (1 of 10) PF02373 - JmjC domain, hydroxylase (JmjC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGCCCGGAGGGACCGGGGCCGCTGAACCGCATGCAGCTGCTCGCAG
Internal bar code:AGATTATATGACCCGCTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGCATTGCTTTGCAGT
Suggested primer 2:CACATCAAGCACAACCGCAA