Insertion junction: CLIP2.035694_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035694
Chromosome:chromosome 8
Location:146518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242914
lncRNA_TCONS_00242958

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCACACACAGACTGCAACATGCCTGTCATTGTTACATGCGGGCGGG
Internal bar code:TCGAACTATGATAGCGGCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1771
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGTCTGCGTGGAGAGAT
Suggested primer 2:GATGTCGAGCGAGGGTTAGG