Insertion junction: CLIP2.035702_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035702
Chromosome:chromosome 2
Location:6554403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389200 UMM8 UbiE/COQ5 methyltransferase family protein; (1 of 1) 2.1.1.288 - Aklanonic acid methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGTCGTCTCTTGAGTTGCTGAATGGGCCCGGTCGCGTGCGCCCTCA
Internal bar code:CCAGGATATGGCCAAAAGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCACCTCCATACTCTC
Suggested primer 2:TGGCTTGGACTGCGTACATT