Insertion junction: CLIP2.035705_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035705
Chromosome:chromosome 2
Location:6964725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389282 PF6-IP3,C1a-32,FAP114 (1 of 2) PF14769 - Flagellar C1a complex subunit C1a-32 (CLAMP); Coiled-Coil Flagellar Associated Protein 114 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAAAGCGCCCACCCCATCACGTCTGGGGTGCATTACTTCCTCTGTA
Internal bar code:GGTTTTGCGATATACGATGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2336
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCTTCCCTCTTCCAG
Suggested primer 2:ACATTGGGTTGGCGTGATCT