Insertion junction: CLIP2.035711_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035711
Chromosome:chromosome 2
Location:7168889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCGTGCGTGCGTGCGCTTGGGCGTGGCGCGCCCACCAGGCCCGCGG
Internal bar code:TCCGATGGTGCTGATTCCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4890
LEAP-Seq percent confirming:93.8596
LEAP-Seq n confirming:214
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:228

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACGACGACACACCTTCT
Suggested primer 2:TGAGATGCCGGTGAGAGAGA