Insertion junction: CLIP2.035711_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035711
Chromosome:chromosome 2
Location:7168891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACACACGCACACACACATGCACATGCGCGCGCACACACACGCACACAC
Internal bar code:GAATACTAGAGCCAGTTAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:65.4762
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGATGCCGGTGAGAGAGA
Suggested primer 2:GTGACGACGACACACCTTCT