Insertion junction: CLIP2.035716_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035716
Chromosome:chromosome 14
Location:2480727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTAGTGCAGCTGCGCCGACGCCACGCCACGCGGTGCGACGCCCCTGAT
Internal bar code:GTGGTTTTGCGAGTACTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGTCGCTCACTGTA
Suggested primer 2:CATTTCCAGCCTCTCCAGGG