Insertion junction: CLIP2.035720_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035720
Chromosome:chromosome 6
Location:2944960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273413 (1 of 1) K14835 - ribosomal RNA methyltransferase Nop2 [EC:2.1.1.-] (NOP2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACACGCGTGCCAAGCAGGCCCCCTGCCCCCCTCCCCCCATAAGAGCA
Internal bar code:TGATGCCTGGATGTTAGCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1578
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCCGCCTTTCCTCCCAG
Suggested primer 2:TCGTCGCCATCATCCACAAA