Insertion junction: CLIP2.035732_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035732
Chromosome:chromosome 8
Location:3709317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380350 (1 of 117) IPR002893 - Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCCGCCACGCTGCCAACCCCAACAGAGAAGCCCAACGAGCCGGTGG
Internal bar code:TGAATAACACAGACATCAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAGTGCGCGTAAGAGAG
Suggested primer 2:TTCCATGCCCGTCTTCTTCC