Insertion junction: CLIP2.035741_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035741
Chromosome:chromosome 4
Location:43137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214097 (1 of 1) 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCTCCCCGCTGAGCTCCCGCCTACATGAACGGCTAAACCCCGCCCCT
Internal bar code:TGGTTAATAGTAAGCTTAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACACATGAACGGCTGCA
Suggested primer 2:GCAAAGTTCCCTCCTCCTCC