Insertion junction: CLIP2.035742_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035742
Chromosome:chromosome 13
Location:3893254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589800 (1 of 4) PTHR10110//PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTTCGTTGGTAGTGTCAGAGCAACCGCGGCCTACAGCACCCGACCA
Internal bar code:GTCCAGCCTTCATTCTCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:957
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTACGAACAGGCCGAGTA
Suggested primer 2:GCGCGACACATGTACTGAAC