Insertion junction: CLIP2.035743_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035743
Chromosome:chromosome 2
Location:5298208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112900 TPT6,TPT5 (1 of 3) K15356 - GDP-mannose transporter (VRG4, GONST1); Putative GDP-mannose transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTGAAAAAGTACCAGTCGCCCAGGATTGTGAGCAGGTTGGACAGGT
Internal bar code:CTAAAGTGCTGGTAGGTACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4056
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCGCATCAAGCACAGA
Suggested primer 2:CGGCGGTGAATATGCAGTTG