Insertion junction: CLIP2.035755_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035755
Chromosome:chromosome 3
Location:2763016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACCTGCAGGCGTACCGTGTGTGGAGCGCACGCAGTCCTCTCGCACCC
Internal bar code:TCGAGTAACGTCAGTCACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGGGCATCAAGGACCTG
Suggested primer 2:AGTATGCACGTGCTGGTCAA