Insertion junction: CLIP2.035759_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035759
Chromosome:chromosome 7
Location:6041599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800867 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGTGGCGGCGGCGGCAGTGGCGCCAGCACACCAGCGGCGTAGGCT
Internal bar code:GGGGAAGCTACTCAGGTGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4804
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGCAGTATCAGCCGG
Suggested primer 2:CCCTACCTATCACCGTTCGC