Insertion junction: CLIP2.035765_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035765
Chromosome:chromosome 3
Location:6677977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195388 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGGTGCCAGGCAAGGTCCTTTCCGTGTCGACAGCGAGGATCCCCGG
Internal bar code:GCGTACGGTTCACCTGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1942
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCGTATTCGCGTGAGAG
Suggested primer 2:AAACCCAACATCAACAGCGC