Insertion junction: CLIP2.035770_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035770
Chromosome:chromosome 2
Location:2805686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCTAGATCTCAACGGCAGCTTGGCCGCTGTCCGGGAGAAGGCAGCC
Internal bar code:CCTACACGTAGGGGAGAAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5108
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCGGCATCTTGGAGGAG
Suggested primer 2:GGAATGCCAAAGCTTCGCAA