Insertion junction: CLIP2.035776_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035776
Chromosome:chromosome 12
Location:2723160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504750 HTA16,HTA43 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACAAGAAGAACCGCATCGTGCCCCGCCACATCCAGCTGGCCATCCGT
Internal bar code:CTGTAGCCCCCGGCGAAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3418
LEAP-Seq percent confirming:84.3373
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCCAACACTCAGCAGC
Suggested primer 2:GAGCGGTTGTTTGACCCAAC