Insertion junction: CLIP2.035781_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035781
Chromosome:chromosome 12
Location:3928969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515400 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGTACACAGCTGCCGCGGCCGCCGCCGCTGCTGGGGTGACGTTCAC
Internal bar code:CTTTCGGAACTCGCGTGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2474
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAGGGAAGCAAACAC
Suggested primer 2:GGATGCGATCAAGACCGACA