Insertion junction: CLIP2.035782_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035782
Chromosome:chromosome 13
Location:5025813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606300 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGTCCAGACCCTAGGGGCTATGCGGTGCTCTACTAGGATGCACTTGG
Internal bar code:ATAATGGAAAAATTACGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2553
LEAP-Seq percent confirming:43.9024
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAAGGGTGGGGTTTCAA
Suggested primer 2:CACTTTGAAACATGGCCGCA