Insertion junction: CLIP2.035784_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035784
Chromosome:chromosome 16
Location:2500065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801916 (1 of 39) PTHR13078:SF53 - PROTEIN MAOC-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGCAATCCAGTCTTGCCGTGTGCGGCGGGGCTTCAGGCGGGTGGCT
Internal bar code:AGGCTCTCGTGTTAGAAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3398
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGAAGCTGGGTTGCC
Suggested primer 2:CTCCCCCTAACTGCCTTTGG