Insertion junction: CLIP2.035791_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035791
Chromosome:chromosome 12
Location:3126724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00075855

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAAATTTCCACAACGCGCCGTCTGGAGGGCTCCGACTCTGCGACCAC
Internal bar code:GGTCTCTGGTATAACGCGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCGATGCATTGAGAAG
Suggested primer 2:TGCTAACCCGCAGCTAACAA