Insertion junction: CLIP2.035792_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035792
Chromosome:chromosome 17
Location:144555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696900 STK20,STPK20 (1 of 2) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR016187//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // C-type lectin fold // Tyrosine-protein kinase, catalytic domain; Serine/threonine protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCAGCGTGAGCATGCCGCGGTACACAACACAGGAGCAGCCTGCGA
Internal bar code:TCCGGGCTCAGGTTGTATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:7.54717
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCACCACACCACCTGG
Suggested primer 2:GTCATTCGCATTCTCGTGGC