Insertion junction: CLIP2.035797_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035797
Chromosome:chromosome 5
Location:939099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGCTGCAGCGCCTCCACCCACGCCGCCCGCTCCGCCTCCGTCGCCA
Internal bar code:TACCAGGGACTTAGCGCCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:954
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGAAGAGGAGCTG
Suggested primer 2:TTGTCGCCACTGCTGGATAG