Insertion junction: CLIP2.035801_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035801
Chromosome:chromosome 5
Location:543246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATGGTGCGGGGCGCACATACATACAGTTAGGACCAAGTTGCCATGA
Internal bar code:AAAAAAGGGGGAGGGGCCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACATTGCCCGTAGTCAA
Suggested primer 2:ACCGACTGGACATCGTGTTC