Insertion junction: CLIP2.035801_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035801
Chromosome:chromosome 5
Location:543246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGCCGGGAGGCTGCTTGCCACCAACTCCGCGGTGTTACGCACCTGCA
Internal bar code:CTTCCTGTTTGGGCGCATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1466
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGACTGGACATCGTGTTC
Suggested primer 2:GGGACATTGCCCGTAGTCAA