Insertion junction: CLIP2.035815_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035815
Chromosome:chromosome 1
Location:1961963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010832 (1 of 1) PTHR12411:SF389 - CATHEPSIN L1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACATCTCTGACTTAAGGCATCTTTCCAGGCAGCCACGGCGGTCAAGG
Internal bar code:TTCACTGAGATACTTCATGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2338
LEAP-Seq percent confirming:44.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGCCAGTTCCCAAAA
Suggested primer 2:GGCTGGGAGTTTGGCTACAT