Insertion junction: CLIP2.035823_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035823
Chromosome:chromosome 12
Location:8128612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGACGGGGGCGGTGGCAGGCAGGCGGCGGGGGCGGCGGGACAGCAGC
Internal bar code:CCTGTTTGGCGAGATGTATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGGGGAACATCATGT
Suggested primer 2:ATTGATCAAATTCGCGCCCG