Insertion junction: CLIP2.035824_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035824
Chromosome:chromosome 17
Location:475768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699000 PAT1 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGTGTGTGTGTGCGGTGAATGTTGGCGTGGCGGTGGAGGCGGCCGT
Internal bar code:TGTTTTAATACTATTGGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:48.9796
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCAGGGTGGAGTAGGAC
Suggested primer 2:CGAACACACACGAACACCAC