Insertion junction: CLIP2.035825_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035825
Chromosome:chromosome 12
Location:5485659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530000 (1 of 11) 2.7.11.24 - Mitogen-activated protein kinase / Stress-activated protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCGCAAGCAGCAGGCGGACGAGGGCGCGGGCAGCGGCACGTGGGGCG
Internal bar code:CCTATACAAGCATATGGGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACGTTACTGCATGCGCC
Suggested primer 2:GGTTTGTTGCAATGTCCGCT