Insertion junction: CLIP2.035835_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035835
Chromosome:chromosome 9
Location:3603569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396772 Similar to Gametolysin and Autolysin; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGACTCTCCACTGAACTGCAGAGGATCCAACAGCTGTACTTCTCC
Internal bar code:GCTGAAACTCCATCTCCTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1920
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTACTTCAAGACGCCGCT
Suggested primer 2:TGGGGACAACATCATCGGTG