Insertion junction: CLIP2.035841_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035841
Chromosome:chromosome 3
Location:3329393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165950 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGGACATGTGCCGACATGCATGTCCACGCCGGGAGGGGCATGAGCA
Internal bar code:TCGGGATATATCGCCTGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACACAGCGGAATTTTG
Suggested primer 2:TGGGCTAGGCTTTAACGTGG