Insertion junction: CLIP2.035843_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035843
Chromosome:chromosome 16
Location:290746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGTGGGTGCAAGATGAAGTCGGGTTGGGTTGTGTGCACCATTGC
Internal bar code:GTTCCAGTATGCGTCGTATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCACACGCATACACAC
Suggested primer 2:GCGAGATGACTTCGAGGAGG