Insertion junction: CLIP2.035849_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035849
Chromosome:chromosome 13
Location:2917355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAGGGCGGCTGACTGGCCAGCAGCTGCAGCCCCATGAAGGCCAGGTG
Internal bar code:CGAAGGATGCGGGCGAGACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGTTGCTTGAACTGCA
Suggested primer 2:AGGCAAGGCAGAAGAGACAC