Insertion junction: CLIP2.035857_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035857
Chromosome:chromosome 3
Location:4446877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175550 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCTGCCGTGCGCGCGCCGCCACCGCCTCTATCTCTTCATGCGACA
Internal bar code:ATCGCGAGACGTGCAGGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3237
LEAP-Seq percent confirming:50.4065
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GACATACGGTAGCAGGACGG
Suggested primer 2:CTGTGTAGCACCTCCCCAAG