Insertion junction: CLIP2.035866_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035866
Chromosome:chromosome 4
Location:1951932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218750 THB4 Truncated hemoglobin; (1 of 1) IPR012292 - Globin/Protoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACTTCGCAACACTCGAGAAAGCTTGAGGTATGACGCAGAACCACTA
Internal bar code:CTTCGTTATTAGACGGGTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:854
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGTTTAAGCGGTTGCAA
Suggested primer 2:CATCAGTGTGAAGGGGTCCC