Insertion junction: CLIP2.035881_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035881
Chromosome:chromosome 12
Location:3225714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499750 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGGGCGGCCGCATGCCCATGCCGCCGCCGCCCATCGGCCGCTGCCC
Internal bar code:GAGCTTAGATCCAGCTCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTGTTCTTCCCATCCG
Suggested primer 2:CCAGCCAGCTACCCATTTGA