Insertion junction: CLIP2.035881_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035881
Chromosome:chromosome 12
Location:3225722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499750 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCGGCATGGGGATGGGCATGGGCATGGGGATGGGTGGCGGGCCGAT
Internal bar code:GAGCTTAGATCCAGCTCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3764
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCAGCTACCCATTTGA
Suggested primer 2:TGTCGTGTTCTTCCCATCCG