Insertion junction: CLIP2.035899_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035899
Chromosome:chromosome 7
Location:2990981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333400 MMP23 Matrix metalloproteinase; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTGAGGCCAAGCACCGCAAAAACCCGTCGCTATGACATCAACCCTA
Internal bar code:GAGTGCAGAGAAGTTGAGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:848
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGGGCTTAAGAGACAAA
Suggested primer 2:GGAAGGAGTTGTCACGAGCA