Insertion junction: CLIP2.035905_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035905
Chromosome:chromosome 17
Location:1683254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802043 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTCTGGCGGTAGGGTCAGGGTCGGTCGCCGTGCCGGCGGCTAGACC
Internal bar code:CGACGTTTTAGATTGCTTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2232
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCTCCCTCTCACAGA
Suggested primer 2:TAGGAGTCGGCTGTAGCAGT