Insertion junction: CLIP2.035906_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035906
Chromosome:chromosome 4
Location:3127839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225850 VAMP73,VAM3,VAMP3 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTAAAGAGCGGCTGGGCGTGCTGTGACGCGTGGCTGGGCACACGTGG
Internal bar code:TTTTATGATTGCATTGATCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAGCTATGAAACCATGC
Suggested primer 2:GTCCGTGCAGAAGAAGGTGA