Insertion junction: CLIP2.035908_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035908
Chromosome:chromosome 12
Location:1624054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486900 (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCTGACTCTCCCTTCTTTGTGCGCGCGGGCCCCGTTTGGCGTTCG
Internal bar code:TAATCACTTTGTCTGCGATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCGGTGAGGTTTGTAA
Suggested primer 2:CGTGCTGGAATCTGTGCTTG