Insertion junction: CLIP2.035917_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035917
Chromosome:chromosome 8
Location:4053695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGGCGGCATCAAGGGCACTGCACGATGAGGAGGACGGAGTGCGTGT
Internal bar code:GGGTCAACAGTGGCTCTTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGCGGTAGATGATTCC
Suggested primer 2:GGTGAAGACCATCCCCAAGG