Insertion junction: CLIP2.035929_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035929
Chromosome:chromosome 6
Location:1561844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261050 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTAGGGTAATGTGCGTGGATAATGGTGTAATGTGTGTGAGGCGATTT
Internal bar code:CCTTACTAACGTGGGGCTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:699
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATTCAACCGCCCTTCCT
Suggested primer 2:ATGATGTCGTACACGGCCTC