Insertion junction: CLIP2.035930_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035930
Chromosome:chromosome 2
Location:1897843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087600 SRH2 SNF2-related DNA/RNA helicase; (1 of 1) K14439 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 (SMARCAD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACTGCCTTGCCGCGCAGTCCTCGGGCCACGCCCTGAGCACCCGCTG
Internal bar code:TTCCATATAATAATTCCCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCCCTACCTTCTTCCG
Suggested primer 2:GTGGAGTACCGCCTACATCG