Insertion junction: CLIP2.035931_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035931
Chromosome:chromosome 3
Location:5950345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189050 EMAN,EAM1 (1 of 1) 3.2.1.130 - Glycoprotein endo-alpha-1,2-mannosidase; Endomannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAATAACAATTACCCGCCGCACCTGTCGATGCCCTCGCGCTCTCGCC
Internal bar code:CGCGGGTTGCGAGGCAAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCAGTTCCCGTTCTTG
Suggested primer 2:CATCTGCGTACTCGTCCTCC